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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3935569_3939949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3935569 - 3939949

Intron Length:

4381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTTCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TAATCTTCATTT

Flanking Amino Acid:

GEQAPPSWMRGVVRMVDKNI

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

68.2

38.2

Major BPS

0.82

0.8

24.9

Major PPT

87.3

0.84

0.7

28.5

Minor 5ss

28.9

-2.4

2.9

28.7

35.6

Minor BPS

51.9

0.14

1.8

70.26

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041223

3916234 - 3940449

24216

ENSAPLT00000028570

3933027 - 3940449

7423