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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3959324_3961204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3959324 - 3961204

Intron Length:

1881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAATAAATAAAT

Flanking Amino Acid:

EHSCKGQDHSVLLKVGSLHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

68.5

0.42

63.1

37.8

Minor 5ss

-2.5

33.4

41.6

Minor BPS

43.9

-0.3

62.13

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040470

3959183 - 3966306

7124