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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3961286_3963554_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3961286 - 3963554

Intron Length:

2269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCTGTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTCCCTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

GTTTCCCTCACA

Flanking Amino Acid:

STGRPQPAPTDTEKSQQNQT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.4

63.4

43.3

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

79.3

0.66

0.8

72.8

32.1

Minor 5ss

37.1

-1.5

3.6

56.6

47.5

Minor BPS

60.2

0.31

2.1

77.12

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040470

3959183 - 3966306

7124