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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3963761_3965036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3963761 - 3965036

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGACTG

5'SS Class:

major

3'SS Sequence:

CTCCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTCTAT

U12 Branch Point Sequence:

GTAACTCTATCC

Flanking Amino Acid:

WTNLTEARVRVWFKNRRAKW

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

57.3

47.4

Major BPS

52.4

0.06

1.3

52.4

42.7

Major PPT

81.8

0.72

0.7

76.1

Minor 5ss

33.7

-1.9

3.4

39.2

46.1

Minor BPS

46.3

-0.3

1.9

57.74

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037034

3959183 - 3966306

7124

ENSAPLT00000040470

3959183 - 3966306

7124