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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4000493_4000776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4000493 - 4000776

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TCATCTCTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTCCCCTTCATC

Flanking Amino Acid:

RVADNSFDAKKGAAGDWGEK

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

67.6

0.44

1.2

Major PPT

77.9

0.63

0.8

72.2

32.3

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

0.36

1.8

71.44

40.3

Associated Gene:

Gene:

NOLC1

Ensembl Gene ID:

ENSAPLG00000011816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012300

4000334 - 4009388

9055