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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4002605_4002801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002605 - 4002801

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGGA

5'SS Class:

major

3'SS Sequence:

ATTCCTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GAGTCTTGAATT

Flanking Amino Acid:

KDSSSSSESSDSDSSDKKTP

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.6

40.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.2

0.57

0.9

69.8

35.9

Minor 5ss

34.7

-1.7

3.5

47.2

48.2

Minor BPS

61.1

0.43

1.4

70.78

40.3

Associated Gene:

Gene:

NOLC1

Ensembl Gene ID:

ENSAPLG00000011816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012300

4000334 - 4009388

9055