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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4006881_4007403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006881 - 4007403

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCCT

5'SS Class:

major

3'SS Sequence:

TTTTTCTCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTTCTCAAAA

Flanking Amino Acid:

EPPKPATPKAGSKAAQATTK

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

66.5

44.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

73.4

0.53

76.5

31.1

Minor 5ss

41.3

-1

3.1

60.4

43.9

Minor BPS

68.8

0.58

1.6

80.83

34.3

Associated Gene:

Gene:

NOLC1

Ensembl Gene ID:

ENSAPLG00000011816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012300

4000334 - 4009388

9055