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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4007579_4008181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4007579 - 4008181

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCCTC

5'SS Class:

major

3'SS Sequence:

TCCTTTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CAAAACTTAATC

Flanking Amino Acid:

DSEEEEKPAKKGAKPAAKPA

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

67.1

44.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

79.8

0.67

0.8

80.2

31.9

Minor 5ss

37.8

-1.4

3.1

45.6

Minor BPS

54.3

0.11

1.6

58.47

Associated Gene:

Gene:

NOLC1

Ensembl Gene ID:

ENSAPLG00000011816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012300

4000334 - 4009388

9055