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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4008298_4008912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4008298 - 4008912

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TGTCCTTTATTT

Flanking Amino Acid:

EDEAPPAKKPANATAVTKAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

85.9

0.81

0.8

80.5

30.3

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

62.8

0.48

1.6

78.04

38.6

Associated Gene:

Gene:

NOLC1

Ensembl Gene ID:

ENSAPLG00000011816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012300

4000334 - 4009388

9055