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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4009183_4009277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4009183 - 4009277

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GGGCGCTGAGCG

Flanking Amino Acid:

ARAFAREAAAKEQDPNHASL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

72.8

0.51

0.8

66.2

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

39.8

-0.9

39.67

43.2

Associated Gene:

Gene:

NOLC1

Ensembl Gene ID:

ENSAPLG00000011816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012300

4000334 - 4009388

9055