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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4038399_4039538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4038399 - 4039538

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAACT

5'SS Class:

major

3'SS Sequence:

CATCTATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATCTATT

Flanking Amino Acid:

AANPVQFMCQAFKIVPYSIE

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

78.1

36.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

74.8

0.56

0.9

66.3

39.5

Minor 5ss

41.7

-0.9

2.9

59.3

44.8

Minor BPS

48.2

-0

2.1

75.48

40.7

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176