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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4039672_4040385_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4039672 - 4040385

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TAGATTCTAACA

Flanking Amino Acid:

NQLEENDMMTNQRDEELPTL

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.1

40.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

84.3

0.77

0.7

79.4

26.2

Minor 5ss

-2.2

3.9

40.4

Minor BPS

50.1

-0

1.7

61.48

38.5

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176