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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4040583_4042737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4040583 - 4042737

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGGAC

U12 Branch Point Sequence:

TTTCCTTGGACT

Flanking Amino Acid:

DLRQFIDEYVETADMLKSHI

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

49.7

-0

1.4

52.4

43.3

Major PPT

88.3

0.86

0.6

82.1

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

67.8

0.64

1.4

85.63

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176