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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4042928_4049141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4042928 - 4049141

Intron Length:

6214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTATGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

ACAAGGTCACCT

Flanking Amino Acid:

GFVPGAPEDLYVEMLQSKPD

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

74.5

35.1

Major BPS

71.2

0.53

72.3

32.8

Major PPT

100

1.12

0.4

100

Minor 5ss

-0.2

2.5

65.4

40.1

Minor BPS

34.1

-1.1

2.4

47.82

44.5

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176