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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4049238_4050665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4049238 - 4050665

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

GTTTGCTTACAA

Flanking Amino Acid:

KDSMLRKFLEGGSMDAPDSE

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

79.4

0.66

0.9

77.6

36.4

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

51.5

0.04

2.1

69.33

42.7

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176