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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4051740_4052698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4051740 - 4052698

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

GATGTTTTCACT

Flanking Amino Acid:

LYVSRGKVKKETIVRPVRDL

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

87.2

0.84

0.7

84.7

30.2

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

50.2

0.09

1.8

68.82

42.5

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176