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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4052905_4054472_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4052905 - 4054472

Intron Length:

1568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTGATATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

AAAGTCTGAAAA

Flanking Amino Acid:

KRSESFRFQQENLKRLRDSI

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.3

39.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.3

0.46

66.8

Minor 5ss

33.8

-1.8

3.4

49.6

46.4

Minor BPS

47.7

-0.1

1.6

54.04

37.5

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176