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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4054546_4054873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4054546 - 4054873

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAACC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGATTTTCAGCT

Flanking Amino Acid:

MEKQKSGKSTDLEITVPIRH

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.5

37.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.7

0.76

0.7

77.7

31.1

Minor 5ss

40.3

-1.1

2.9

53.5

43.3

Minor BPS

49.9

0.07

1.7

69.55

41.3

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176