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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4056744_4057270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4056744 - 4057270

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTACTTTTAAAA

Flanking Amino Acid:

VSSGMEGDSEDNEVSEASRS

Intron Amino Acid Position:

747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.7

0.82

0.7

85.6

28.6

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

57.7

0.24

1.4

63.56

Associated Gene:

Gene:

PIK3AP1

Ensembl Gene ID:

ENSAPLG00000011139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044355

4030499 - 4058542

28044

ENSAPLT00000011654

4018215 - 4057390

39176