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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4076900_4080125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4076900 - 4080125

Intron Length:

3226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GATGCTTAAACT

Flanking Amino Acid:

QMYIDDLPIWGIVGEADENG

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

32.9

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

78.3

0.64

0.9

72.5

37.7

Minor 5ss

28.5

-2.5

3.2

31.7

42.6

Minor BPS

57.9

0.32

1.8

73.5

43.4

Associated Gene:

Gene:

TM9SF3

Ensembl Gene ID:

ENSAPLG00000010601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047549

4068510 - 4104440

35931

ENSAPLT00000011082

4069121 - 4104440

35320