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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4080287_4082537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4080287 - 4082537

Intron Length:

2251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

AGCTTCTCAAGT

Flanking Amino Acid:

PNTKIQMSYSVKWKKSDVKF

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

89.5

0.89

0.6

20.1

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

50.2

0.09

1.9

66.81

43.9

Associated Gene:

Gene:

TM9SF3

Ensembl Gene ID:

ENSAPLG00000010601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047549

4068510 - 4104440

35931

ENSAPLT00000011082

4069121 - 4104440

35320