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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4084730_4085249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4084730 - 4085249

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTAGACTTAATT

Flanking Amino Acid:

YSKEEEMDDMDRDLGDEYGW

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

32.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

76.2

0.59

0.9

69.4

41.7

Minor 5ss

40.7

-1

3.1

54.8

43.3

Minor BPS

60.7

0.41

1.7

73.52

43.5

Associated Gene:

Gene:

TM9SF3

Ensembl Gene ID:

ENSAPLG00000010601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047549

4068510 - 4104440

35931

ENSAPLT00000011082

4069121 - 4104440

35320