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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4088111_4089996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4088111 - 4089996

Intron Length:

1886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCCTTCTTACAG

Flanking Amino Acid:

FGGSLYARQGGRRWIKQMFI

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

88.5

0.87

0.6

83.5

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

-0.1

1.8

55.39

46.1

Associated Gene:

Gene:

TM9SF3

Ensembl Gene ID:

ENSAPLG00000010601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047549

4068510 - 4104440

35931

ENSAPLT00000011082

4069121 - 4104440

35320