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Intron Name: Anas_platyrhynchos_platyrhynchos_6_413771_415160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

413771 - 415160

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTCCTCTGATTT

Flanking Amino Acid:

RKQKVEAQKQAEKLMKQIGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.8

0.65

0.7

78.4

30.2

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

49.8

0.06

1.7

69.64

41.7

Associated Gene:

Gene:

ATAD1

Ensembl Gene ID:

ENSAPLG00000001653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044155

412823 - 431340

18518

ENSAPLT00000038786

402178 - 428029

25852

ENSAPLT00000001954

412823 - 428835

16013