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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4140734_4144339_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4140734 - 4144339

Intron Length:

3606

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGAGTAT

5'SS Class:

major

3'SS Sequence:

CTGGTCCATTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATATATTATTG

Flanking Amino Acid:

CSGMGGVFLAVIAFEVRYGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

61.9

42.9

Major BPS

75.9

0.64

66.1

40.5

Major PPT

49.2

-0

1.7

58.8

42.2

Minor 5ss

-2.8

4.4

45.4

49.7

Minor BPS

46.6

-0.4

1.9

54.14

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028100

4140544 - 4198383

57840