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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4166844_4168501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4166844 - 4168501

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATTCTTGGATT

Flanking Amino Acid:

IPYVIGGNFTGTQRAIFKQA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

82.1

0.72

0.9

78.8

38.6

Minor 5ss

32.9

-2

2.7

43.5

Minor BPS

65.4

0.57

1.4

80.4

35.4

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044124

4139595 - 4195199

55605

ENSAPLT00000028100

4140544 - 4198383

57840

ENSAPLT00000010332

4144366 - 4198383

54018