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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4168620_4168971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4168620 - 4168971

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

ATGACCTGTATG

Flanking Amino Acid:

SFIVFTYRTCGCCSYVGRRG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

77.9

38.6

Major BPS

74.2

0.6

0.9

75.7

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

40.6

-1

2.9

49.4

46.6

Minor BPS

46.3

-0.4

1.9

51.34

43.2

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044124

4139595 - 4195199

55605

ENSAPLT00000028100

4140544 - 4198383

57840

ENSAPLT00000010332

4144366 - 4198383

54018