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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4174641_4180037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4174641 - 4180037

Intron Length:

5397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

CGCTCTCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GTTTTGTTATTT

Flanking Amino Acid:

AQARKLYKCPACGETLQDTT

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.6

0.55

0.8

69.1

31.5

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

50.7

0.1

2.2

75.8

41.6

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010332

4144366 - 4198383

54018

ENSAPLT00000044124

4139595 - 4195199

55605

ENSAPLT00000028100

4140544 - 4198383

57840