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Intron Name: Anas_platyrhynchos_platyrhynchos_6_418637_421226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

418637 - 421226

Intron Length:

2590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGATGTACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TAGTCATCATCT

Flanking Amino Acid:

DGLDTDYNCQVIVMGATNRP

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

0.67

1.1

77.7

37.1

Major PPT

67.5

0.39

43.4

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

48.7

-0

2.1

71.04

45.2

Associated Gene:

Gene:

ATAD1

Ensembl Gene ID:

ENSAPLG00000001653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001954

412823 - 428835

16013

ENSAPLT00000044155

412823 - 431340

18518

ENSAPLT00000038786

402178 - 428029

25852