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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4188900_4189859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4188900 - 4189859

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CCTTTTCTATTT

Flanking Amino Acid:

HIGITFQAFEIEWHDTCSYD

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

89.8

0.9

0.7

85.1

28.4

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

46.5

-0.1

1.9

62.98

42.5

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044124

4139595 - 4195199

55605

ENSAPLT00000028100

4140544 - 4198383

57840

ENSAPLT00000010332

4144366 - 4198383

54018