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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4190056_4192284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4190056 - 4192284

Intron Length:

2229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAG

U12 Branch Point Sequence:

TTTCTCCTGACA

Flanking Amino Acid:

KAGFAANFFKEMDECSLPDN

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

49.4

-0

1.6

48.8

46.3

Major PPT

0.68

0.9

76.6

32.1

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

61.7

0.36

1.7

76.64

33.5

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044124

4139595 - 4195199

55605

ENSAPLT00000028100

4140544 - 4198383

57840

ENSAPLT00000010332

4144366 - 4198383

54018