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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4192411_4193246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4192411 - 4193246

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTGCCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATTTATT

Flanking Amino Acid:

ELTADKRSCEAACGGFITKL

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

76.6

0.6

0.9

66.7

39.9

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

61.7

0.45

1.9

82.28

38.7

Associated Gene:

Gene:

TLL2

Ensembl Gene ID:

ENSAPLG00000009874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044124

4139595 - 4195199

55605

ENSAPLT00000028100

4140544 - 4198383

57840

ENSAPLT00000010332

4144366 - 4198383

54018