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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4210576_4211761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4210576 - 4211761

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

CTCCCCTTCACT

Flanking Amino Acid:

IYFREHFIPKGTTIFPVLSS

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

68.2

42.9

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

80.2

0.68

0.9

74.4

35.1

Minor 5ss

28.4

-2.5

2.9

32.7

Minor BPS

63.1

0.49

1.8

77.05

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030390

4209754 - 4215382

5629