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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4221912_4222077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4221912 - 4222077

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAC

U12 Branch Point Sequence:

TTTACTGCAGCC

Flanking Amino Acid:

PLSACGTTFQVTGGHAVYEN

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

56.2

0.16

1.3

51.3

43.9

Major PPT

81.8

0.72

0.9

76.3

37.7

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

-0.4

2.3

63.24

42.4

Associated Gene:

Gene:

ZP4

Ensembl Gene ID:

ENSAPLG00000002531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002543

4220057 - 4224532

4476