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Intron Name: Anas_platyrhynchos_platyrhynchos_6_42310_43772_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42310 - 43772

Intron Length:

1463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTCTTTTAAAT

Flanking Amino Acid:

PLSSMATPEDGEDFIDVIEE

Intron Amino Acid Position:

716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

78.1

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.8

73.1

Minor 5ss

35.7

-1.6

42.9

43.6

Minor BPS

66.1

0.58

1.3

79.19

36.4

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790