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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4235980_4236970_R

Intron Information:

Intron Rank:

137148

Intron Class:

major

Intron Phase:

Intron Coordinates:

4235980 - 4236970

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTTCG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTGTGTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.8

38.6

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

0.7

0.9

74.9

34.7

Minor 5ss

35.6

-1.6

2.8

42.5

44.2

Minor BPS

55.2

0.24

2.2

79.01

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028961

4235531 - 4256939

21409