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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4240114_4246530_R

Intron Information:

Intron Rank:

137150

Intron Class:

major

Intron Phase:

Intron Coordinates:

4240114 - 4246530

Intron Length:

6417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGTGTTGTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

77.5

0.62

0.9

70.5

39.9

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

42.1

-0.5

2.3

62.87

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028961

4235531 - 4256939

21409