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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4247385_4256725_R

Intron Information:

Intron Rank:

137151

Intron Class:

major

Intron Phase:

Intron Coordinates:

4247385 - 4256725

Intron Length:

9341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTTCCTTTATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

84.2

0.77

0.8

80.6

30.3

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

74.4

0.62

1.6

79.54

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028961

4235531 - 4256939

21409