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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4285501_4286089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4285501 - 4286089

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTACG

5'SS Class:

major

3'SS Sequence:

TTCTTGTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

ATCTACTGAAAT

Flanking Amino Acid:

IAMRDRNALQNCFWKYLIVD

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

42.9

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

84.4

0.77

0.8

80.5

31.5

Minor 5ss

47.7

-0.2

2.2

60.9

43.5

Minor BPS

55.6

0.25

1.8

74.08

41.9

Associated Gene:

Gene:

HELLS

Ensembl Gene ID:

ENSAPLG00000002649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002725

4279332 - 4300102

20771