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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4288172_4288669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4288172 - 4288669

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTACT

5'SS Class:

major

3'SS Sequence:

CTGTTTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTGTTGATGACA

Flanking Amino Acid:

TIRKLLGNNEEEVIELSPTG

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.1

37.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.63

0.8

72.6

32.3

Minor 5ss

50.1

0.01

2.2

40.2

Minor BPS

44.6

-0.4

2.3

58.15

41.9

Associated Gene:

Gene:

HELLS

Ensembl Gene ID:

ENSAPLG00000002649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002725

4279332 - 4300102

20771