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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4288813_4289899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4288813 - 4289899

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

CACATCTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CTTTCTGTACTA

Flanking Amino Acid:

SKMQEEVEKERPVVEVSMPM

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

40.9

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

63.3

0.3

1.1

59.7

40.4

Minor 5ss

39.8

-1.1

3.4

59.5

44.9

Minor BPS

48.5

-0.1

2.2

66.01

41.8

Associated Gene:

Gene:

HELLS

Ensembl Gene ID:

ENSAPLG00000002649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002725

4279332 - 4300102

20771