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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4291316_4291396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4291316 - 4291396

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACCA

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAG

U12 Branch Point Sequence:

TACTAAGGAATC

Flanking Amino Acid:

LPELKKRGHKVLLFSQMTLM

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.7

37.5

Major BPS

62.8

0.32

1.5

69.9

35.3

Major PPT

82.2

0.72

0.8

81.2

36.5

Minor 5ss

31.6

-2.1

3.1

40.3

45.3

Minor BPS

39.3

-0.8

2.2

50.64

39.8

Associated Gene:

Gene:

HELLS

Ensembl Gene ID:

ENSAPLG00000002649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002725

4279332 - 4300102

20771