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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4305469_4307038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4305469 - 4307038

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

GTTCCTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGTTCCTTCCCC

Flanking Amino Acid:

PMCDKCGSGIVGVFVKIRDK

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

70.9

40.9

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

77.5

0.62

0.8

69.3

36.9

Minor 5ss

37.1

-1.5

2.8

43.3

43.8

Minor BPS

43.8

-0.5

3.7

67.83

43.5

Associated Gene:

Gene:

PDLIM1

Ensembl Gene ID:

ENSAPLG00000003394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003468

4305282 - 4345556

40275

ENSAPLT00000048359

4305282 - 4350123

44842

ENSAPLT00000040059

4305282 - 4346821

41540