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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4307154_4310208_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4307154 - 4310208

Intron Length:

3055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

CCACCCCCAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

ATGCTCTGAAGC

Flanking Amino Acid:

LQEILESEEKDPTKPSGFRS

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

75.3

40.8

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

45.8

-0.2

1.6

47.5

29.2

Minor 5ss

40.5

-1.1

3.1

57.5

46.7

Minor BPS

48.8

-0.1

1.7

58.72

40.1

Associated Gene:

Gene:

PDLIM1

Ensembl Gene ID:

ENSAPLG00000003394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040059

4305282 - 4346821

41540