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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4310317_4316015_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4310317 - 4316015

Intron Length:

5699

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTA|GCAAGCCGT

5'SS Class:

major

3'SS Sequence:

GTCATAGACAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCGTCAT

U12 Branch Point Sequence:

TCGTCATAGACA

Flanking Amino Acid:

SKTSPGAPEPKSEVYKMLQE

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

60.9

43.3

Major BPS

72.2

0.55

1.2

73.6

41.8

Major PPT

44.4

-0.3

1.7

42.4

41.5

Minor 5ss

31.1

-2.2

4.2

49.2

42.2

Minor BPS

49.4

-0

63.13

43.4

Associated Gene:

Gene:

PDLIM1

Ensembl Gene ID:

ENSAPLG00000003394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040059

4305282 - 4346821

41540