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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4310364_4316008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4310364 - 4316008

Intron Length:

5645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

GTTTCATTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

AGCCATTTAACA

Flanking Amino Acid:

TSPGAPEPSKPLDQHNQPPG

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.3

82.1

37.7

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

80.2

0.68

0.8

77.5

35.7

Minor 5ss

43.5

-0.7

2.9

65.1

39.1

Minor BPS

55.4

0.17

1.5

61.1

38.5

Associated Gene:

Gene:

PDLIM1

Ensembl Gene ID:

ENSAPLG00000003394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003468

4305282 - 4345556

40275