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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4316200_4326012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4316200 - 4326012

Intron Length:

9813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GCACCTCTGATT

Flanking Amino Acid:

YKMNLASQPQEIRHIGSAHN

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.4

1.09

0.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

75.3

0.57

0.9

69.4

35.9

Minor 5ss

35.1

-1.7

2.7

41.5

45.1

Minor BPS

46.8

-0.1

1.6

58.51

38.7

Associated Gene:

Gene:

PDLIM1

Ensembl Gene ID:

ENSAPLG00000003394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040059

4305282 - 4346821

41540

ENSAPLT00000003468

4305282 - 4345556

40275