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Intron Name: Anas_platyrhynchos_platyrhynchos_6_434464_436083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

434464 - 436083

Intron Length:

1620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ACGCTCTGAATC

Flanking Amino Acid:

LKQKFREMNADAVFAFQLRN

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

84.6

0.78

0.8

81.8

28.5

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

50.1

-0

1.4

54.46

37.7

Associated Gene:

Gene:

PAPSS2

Ensembl Gene ID:

ENSAPLG00000002394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021910

430941 - 460321

29381

ENSAPLT00000002420

432625 - 459000

26376

ENSAPLT00000002419

432625 - 459000

26376