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Intron Name: Anas_platyrhynchos_platyrhynchos_6_4345530_4346812_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4345530 - 4346812

Intron Length:

1283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTTCCCT

5'SS Class:

weak_major

3'SS Sequence:

CATCGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

CGCTCCGCATCG

Flanking Amino Acid:

LPQGPGPWGFRLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.4

51.7

44.9

Major BPS

62.5

0.31

1.2

38.9

Major PPT

69.2

0.43

61.5

39.7

Minor 5ss

42.1

-0.9

2.9

58.5

45.5

Minor BPS

39.9

-0.9

2.3

43.81

47.6

Associated Gene:

Gene:

PDLIM1

Ensembl Gene ID:

ENSAPLG00000003394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040059

4305282 - 4346821

41540