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Intron Name: Anas_platyrhynchos_platyrhynchos_6_437565_438913_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

437565 - 438913

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

AGGATGCTAACA

Flanking Amino Acid:

LLNGKNPSVADGVINLTIPI

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

78.3

0.64

0.9

72.7

37.5

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

42.1

-0.6

2.2

51.62

39.8

Associated Gene:

Gene:

PAPSS2

Ensembl Gene ID:

ENSAPLG00000002394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021910

430941 - 460321

29381

ENSAPLT00000002420

432625 - 459000

26376